safar | Institute of Experimental Botany of the Czech Academy of Sciences

RNDr. Jan Šafář, Ph.D.

Email: [email protected]
Tel.: +420 585 238 710

Address:
Šlechtitelů 31, 783 71, Olomouc - Holice, Česká republika
Room number: 204

Profile

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Jan Šafář EN

Position:

senior scientist

Workgroup:

Centre of Plant Structural and Functional Genomics

Publications:

Number of publications: 64

2016

Construction of BAC libraries from flow-sorted chromosomes

Šafář, J., Šimková, H., Doležel, J.
Plant Cytogenetics: Methods and Protocols 135-149 2016 Fulltext: PDF link on intranet only

2015

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements

Akpinar, B.A., Magni, F., Yuce, M., Lucas, S.J., Šimková, H., Šafář, J., Vautrin, S., Bergès, H., Cattonaro, F., Doležel. J., Budak, H.
BMC GENOMICS 16 453 2015 Fulltext: PDF link on intranet only
A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B

Kobayashi, F., Wu, J., Kanamori, H., Tanaka, T., Katagiri, S., Karasawa, W., Kaneko, S., Watanabe, S., Sakaguchi, T., Hanawa, Y., Fujisawa, H., Kurita, K., Abe, C., Iehisa, J.C.M., Ohno, R., Šafář, J., Šimková, H., Mukai, Y., Hamada, M., Saito, M., Ishikawa, G., Katayose, Y., Endo, T.R., Takumi, S., Nakamura, T., Sato, K., Ogihara, Y., Hayakawa, K., Doležel, J., Nasuda, S., Matsumoto, T., Handa, H.
BMC GENOMICS 16 595 2015 Fulltext: PDF link on intranet only

2014

Can a late bloomer become an early bird? Tools for flowering time adjustment

Milec Z., Valárik M., Bartoš J., Šafář J.
BIOTECHNOLOGY ADVANCES 32 200-214 2014 Fulltext: PDF link on intranet only
The Wheat Black Jack: Advances towards sequencing the 21 chromosomes of bread wheat

Choulet, F., Caccamo, M., Wright, J., Alaux, M., Šimková, H., Šafář, J., Leroy, P., Doležel, J., Rogers, J., Eversole, K., Feuillet, C.
Genomics of plant genetic resources 405-438 2014 Fulltext: PDF link on intranet only
Structural and functional partitioning of bread wheat chromosome 3B

Choulet, F., Alberti, A., Theil, S., Glover, N., Barbe, V., Daron, J., Pingault, L., Sourdille, P., Couloux, A., Paux, E., Leroy, P., Mangenot, S., Guilhot, N., Le Gouis, J., Balfourier, F., Alaux, M., Jamilloux, V., Poulain, J., Durand, C., Bellec, A., Gaspin, C., Šafář, J., Doležel, J., Rogers, J., Vandepoele, K., Aury, JM., Mayer, K., Berges, H., Quesneville, H., Wincker, P., Feuillet, C.
SCIENCE 345(6194) 1249721 2014 Fulltext: PDF link on intranet only
Expression response of duplicated metallothionein 3 gene to copper stress in Silene vulgaris ecotypes

Nevrtalova, E., Baloun, J., Hudzieczek, V., Cegan, R., Vyskot, B., Doležel, J., Šafář, J., Milde, D., Hobza, R.
PROTOPLASMA 251 1427-1439 2014 Fulltext: PDF link on intranet only
Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A

Poursarebani, N., Nussbaumer, T., Šimková, H., Šafář, J., Witsenboer, H., van Oeveren, J., Doležel, J., Mayer, K.F.X., Stein, N., Schnurbusch, T.
PLANT JOURNAL 79 334-347 2014 Fulltext: PDF link on intranet only

2013

Physical mapping integrated with syntenic analysis to characterize the gene space of the long arm of wheat chromosome 1A.

Lucas, S.J., Akpınar, B.A., Kantar, M., Weinstein, Z., Aydınoglu, F., Šafář, J., Šimková, H., Frenkel, Z., Korol, A., Magni, F., Cattonaro, F., Vautrin, S., Bellec, A., Berges, H., Doležel, J., Budak, H.
PLOS ONE 8 e59542 2013 Fulltext: PDF link on intranet only
A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat

Philippe, R., Paux, E., Bertin, I., Sourdille, P., Choulet, F., Laugier, C., Šimková, H., Šafář, J., Bellec, A., Vautrin, S., Frenkel, Z., Cattonaro, F., Magni, F., Scalabrin, S., Martis, M.M., Mayer, K.F.X., Korol, A., Bergès, H., Doležel, J., Feuillet, C.
GENOME BIOLOGY 14 R64 2013 Fulltext: PDF link on intranet only

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